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BioFrontiers Advanced Light Microscsopy Core Publications

Please report publications that contain data collected within the BioFrontiers Advanced Imaging Resource to Joe Dragavon.

Total Publications: 28

2016 (3)

  • Bennet, C. G.; Riemondy, K.; Chapnick, D. A.; Bunker, E.; Liu, X.; Kuersten, S.; Yi, R. Genome-wide analysis of Musashi-2 targets reveals novel functions in governing epithelial cell migration. 2016, Nucleic Acids Res. Molecular Devices ImageXpress MicroXL
  • Floren, M.; Bonani, W.; Dhamarajan, A.; Motta, A.; Migliarini, C.; Tan, W. Human mesenchymal stem cells cultured on silk hydrogels with variable stiffness and growth factor differentiate into mature smooth muscle cell phenotype. 2016, Acta Biomaterialia, 31, 156–66. Nikon A1R
  • Jain, S.; Wheeler, J. R.; Walters, R. W.; Agrawal, A.; Barsic, A.; Parker, R. ATPase-Modulated Stress Granules Contain a Diverse Proteome and Substructure. 2016, Cell, 164, 487 - 98. Nikon N-STORM with the Double-Helix Module

2015 (8)

  • Wong, H.; Levenga, J.; Cain, P.; Rothermel, B.; Klann, E.; Hoeffer, C. RCAN1 overexpression promotes age‑dependent mitochondrialdysregulation related to neurodegeneration in Alzheimer’s disease. 2015, Acta Neruopathol, 130, 829 - 43. Nikon A1R
  • Wang, D.; Renfeng, H.; Mabry, J.; Miao, B.; Wu, D. T.; Kaloian, K.; Schwartz, D. K. Scaling of Polymer Dynamics at an Oil-Water Interface in Regimes Dominated by Viscouls Drag and Desorption-Mediated Flight. 2015, J. Am. Chem. Soc., 137, 12312 - 20. Nikon N-STORM
  • You, J.; O'Hara, S. D.; Velupillai, P.; Castle, S.; Levery, S.; Garcea, R. L.; Benjamin, T. Ganglioside and Non-ganglioside Mediated Host Responses to the Mouse Polyomavirus. 2015, PLoS Pathog, 11, e1005175. Nikon A1R
  • Buch, M. H.; Liaci, A. M.; O'Hara, S. D.; Garcea, R. L.; Neu, U.; Stehle, T. Structural and Functional Analysis of Murine Polyomavirus Capsid Proteins Establish the Determinants of Ligand Recognition and Pathogenicity. 2015, PLoS Pathog, 11, e1005104. Molecular Devices ImageXpress MicroXL and Nikon A1R
  • Chapnick, D. A.; Bunker, E.; Liu, X. A biosensor for the activity of the “sheddase” TACE (ADAM17) reveals novel and cell type-specific mechanisms of TACE activation. 2015, Sci. Sig, 8, rs1. Molecular Devices ImageXpress MicroXL and Nikon A1R
  • Baratta, M.; Pomrenze, M.; Nakamura, S.; Dolzani, S.; Cooper, D. Control Over Stress Accelerates Extinction of Drug Seeking via Prefrontal Cortical Activation. 2015, Neurobiology of Stress, 2, 20 - 27. Nikon A1R
  • Floren, M.; Tan, W. Three-Dimensional, Soft Neotissue Arrays as High Throughput Platforms for the Interrogation of Engineered Tissue Environments. 2015, Biomaterials, 59, 39 - 52. Nikon A1R
  • Dean, K. M.; Lubbeck, J. L.; Davis, L. M.; Regmi, C. K.; Chapagain, P. P.; Gerstman, B. S.; Jimenez, R.; Palmer, A. E. Microfluidics-Based Selection of Red-Fluorescent Proteins with Decreased Rates of Photobleaching. 2015, Integr Biol, 7, 263 - 73. Nikon A1R

2014 (7)

  • Lee, S.; Zhang, C.; Liu, X. Role of Glucose Metabolism and ATP in Maintaining PINK1 Levels During Parkin-mediated Mitochondrial Responses. 2014, J Biol Chem. ImageXpress MicroXL and Nikon A1R
  • Zhang, Z.; Lee, S.: Peng, Y.; Bunker, E.; Shen, C.; Giaime, E.; Shen, J.; Shen, J.; Zhou, Z.; Liu, X. A Chemical Genetic Approach to Probe the Function of PINK1 in Mitochondrial Dynamics. 2014, Cell Research. ImageXpress MicroXL and Nikon A1R
  • Zhang, Z.; Lee, S.: Peng, Y.; Bunker, E.; Giaime, E.; Shen, J.; Zhou, Z.; Liu, X. PINK1 Triggers Autocatalytic Activation of Parkin to Specify Cell Fate Decisions. 2014, Curr Biol, 24, 1854 - 1865. ImageXpress MicroXL and Nikon A1R
  • Ziemba, B. P.; Li, J.; Landgraf, K. E.; Knight, J. D.; Voth, G. A.; Falke, J. J. Single Molecule Studies Reveal a Hidden Step in the Activation Mechanism of Membrane-Bound Protein Kinase C Alpha. 2014, Biochemistry, 53, 1697 - 713. Nikon A1R
  • McKay, D. B.; Xi, L.; Cech, T. R. Structure and Function of Steroid Receptor RNA Activator Protein, the Proposed Partner of SRA Noncoding RNA. 2014, J Mol Biol, 426, 1766 - 85. Nikon A1R
  • Griffith, E. C.; Rapf, R. J.; Shoemaker, R. K.; Carpenter, B. K.; Vaida, V. Photoinitiated Synthesis of Self-Assembled Vesicles. 2014, J Am Chem Soc, 136, 3784 - 7. Nikon A1R
  • Chapnick, D. A.; Liu, X. Leader cell positioning drives wound-directed collective migration in TGFβ-stimulated epithelial sheets. 2014, Mol Biol Cell, 25, 1586 - 93. Molecular Devices ImageXpress MicroXL

2013 (8)

  • Nakashima, M.; Nandakumar, J.; Sullivan, K. D.; Espinosa, J. M.; Cech, T. R. Inhibition of Telomerase Recruitment and Cancer Cell Death. 2013, J Biol Chem, 288, 33171 - 80.  Zeiss Axiovert 200M
  • Natale, A. M.; Duplantis, J. L.; Piasta, K. N.; Falke, J. J. Structure, Function and On-Off Switching of a Core Unit Contact between CheA Kinase and CheW Adaptor Protein in the Bacterial Chemosensory Array: A Disulfide Mapping and TAM-IDS Study. 2013, Biochemistry, 44, 7753 - 65.  Nikon Te-2000
  • Witze, E. S.; Connacher, M. K.; Houel, S.; Schwartz, M. P.; Morphew, M. K.; Reid, L.; Sacks, D. B.; Anseth, K. S.; Ahn, N. G. Wnt5a Directs Polarized Calcium Gradients by Recruiting Cortical Endoplasmic Reticulum to the Cell Trailing Edge. 2013, Dev Cell, 26, 645 - 57.  Olympus IX-81, Nikon Te-2000, and Nikon A1R
  • Guess, M. G.; Barthel, K. K.; Pugach, E. K.; Leinwand, L. A. Measuring microRNA reporter activity in skeletal muscle using hydrodynamic limb vein injection of plasmid DNA combined with in vivo imaging. 2013, Skelet Muscle, 3, 19.  Nikon Te-2000
  • Qin, Y.; Miranda, J. G.; Stoddard, C. I.; Dean, K. M.; Galato, D. F.; Palmer, A. E. Direct Comparison of a Genetically Encoded Sensor and Small Molecule Indicator: Implications for Quantification of Cytosolic Zn2+. 2013, ACS Chem Biol, 8, 2366 - 71. Zeiss Axiovert 200M and Nikon A1R Confocal
  • Piasta, K. N.; Ulliman, C. J.; Slivka, P. F.; Crane, B. R.; Falke, J. J. Defining a Key Receptor-CheA Kinase Contact and Elucidating Its Function in the Membrane-Bound Bacterial Chemosensory Array: A Disulfide Mapping and TAM-IDS Study. 2013, Biochemistry, 52, 3866 - 80. Nikon Te-2000
  • Davis, L. M.; Lubbeck, J. L.; Dean, K. M.; Palmer, A. E.; Jimenez, R. Microfluidic cell sorter for use in developing red fluorescent proteins with improved photostability. 2013, Lab Chip, 13, 2320 - 7. Zeiss Axiovert 200M
  • Chapnick, D. A.; Jacobsen, J,; Liu, X. The Development of a Novel High Throughput Computational Tool for Studying Individual and Collective Cellular Migration. 2013, PlosOne. Molecular Devices ImageXpress MicroXL

2012 (2)

  • Geng, X.; Huang, C.; Qin, Y.; McCombs, J. E.; Yuan, Q.; Harry, B. L.; Palmer, A. E.; Xia, N. S.; Xue, D. Hepatitis B virus X protein targets Bcl-2 proteins to increase intracellular calcium, required for virus replication and cell death induction. 2012, Proc Nat Acad Sci USA, 109, 18471 - 6. Zeiss Axiovert 200M
  • Park, J. G.; Qin, Y.; Galati, D. F.; Palmer, A. E. New Sensors for Quantitative Measurement of Mitochondrial Zn(II). 2012, ACS Chem Biol, 7, 1636 - 40. Zeiss Axiovert 200M and Nikon A1R Confocal